Open data
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Deployed on AWS
The “Cryo-EM SPA Workflow Records” contains all outputs of all processing steps involved in cryogenic electron microscopy (cryo-EM) single particle analysis (SPA), including both intermediate and final output data. The primary focus will be on data generated by RELION and CryoSPARC, two widely used software packages for :Cryo-EM SPA. These records will be archived systematically. To ensure the data remains reproducible while minimizing storage demands, large-sized files that can be regenerated will be excluded prior to registration. The aim is to retain only the essential metadata, processing parameters, and representative outputs that allow for full reconstruction of the analysis pipeline. This approach balances the need for long-term data preservation with practical considerations for storage capacity. Through this effort, we seek to enhance transparency and reproducibility in cryo-EM research by providing a structured and accessible record of the analysis process. Importantly, [...]
Overview
The “Cryo-EM SPA Workflow Records” contains all outputs of all processing steps involved in cryogenic electron microscopy (cryo-EM) single particle analysis (SPA), including both intermediate and final output data. The primary focus will be on data generated by RELION and CryoSPARC, two widely used software packages for :Cryo-EM SPA. These records will be archived systematically. To ensure the data remains reproducible while minimizing storage demands, large-sized files that can be regenerated will be excluded prior to registration. The aim is to retain only the essential metadata, processing parameters, and representative outputs that allow for full reconstruction of the analysis pipeline. This approach balances the need for long-term data preservation with practical considerations for storage capacity. Through this effort, we seek to enhance transparency and reproducibility in cryo-EM research by providing a structured and accessible record of the analysis process. Importantly, the use of this dataset is intended to facilitate the development of future AI algorithms in the field of Cryo-EM.
Features and programs
Open Data Sponsorship Program
This dataset is part of the Open Data Sponsorship Program, an AWS program that covers the cost of storage for publicly available high-value cloud-optimized datasets.
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This is a publicly available data set. No subscription is required.
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Open data resources
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- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- Cryo-EM SPA Workflow Records
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::cryoem-spa-workflow-records-public
- AWS region
- ap-northeast-1
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://cryoem-spa-workflow-records-public/
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How to cite
Cryo-EM SPA Workflow Records was accessed on DATE from https://registry.opendata.aws/cryoem-spa-workflow-records .
License
CC0
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