Sold by: Institut Pasteur
Open data
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Deployed on AWS
This dataset contains high-resolution ExA-SPIM (Expansion-Assisted Selective Plane Illumination Microscopy) light-sheet imaging data of interhemispheric cortical connectivity in the mouse brain. Whole-brain volumes are acquired at near-isotropic sub-micron resolution following tissue expansion and clearing, enabling visualization and reconstruction of individual callosal projection neurons and their axonal arbors spanning both hemispheres. Data is stored in OME-Zarr format for efficient cloud-based access and multiscale visualization.
Overview
This dataset contains high-resolution ExA-SPIM (Expansion-Assisted Selective Plane Illumination Microscopy) light-sheet imaging data of interhemispheric cortical connectivity in the mouse brain. Whole-brain volumes are acquired at near-isotropic sub-micron resolution following tissue expansion and clearing, enabling visualization and reconstruction of individual callosal projection neurons and their axonal arbors spanning both hemispheres. Data is stored in OME-Zarr format for efficient cloud-based access and multiscale visualization.
Features and programs
Open Data Sponsorship Program
This dataset is part of the Open Data Sponsorship Program, an AWS program that covers the cost of storage for publicly available high-value cloud-optimized datasets.
Pricing
This is a publicly available data set. No subscription is required.
Legal
Content disclaimer
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Delivery details
AWS Data Exchange (ADX)
AWS Data Exchange is a service that helps AWS easily share and manage data entitlements from other organizations at scale.
Open data resources
Available with or without an AWS account.
- How to use
- To access these resources, reference the Amazon Resource Name (ARN) using the AWS Command Line Interface (CLI). Learn more
- Description
- ExA-SPIM light-sheet microscopy volumes of mouse brains in OME-Zarr format, with sidecar JSON metadata files describing subjects, acquisition parameters, and processing provenance. Organized as a flat list of data assets following AIND-style naming conventions.
- Resource type
- S3 bucket
- Amazon Resource Name (ARN)
- arn:aws:s3:::haisslab
- AWS region
- eu-west-3
- AWS CLI access (No AWS account required)
- aws s3 ls --no-sign-request s3://haisslab/
- Description
- Notifications published whenever new objects are added to the dataset bucket. Subscribe to receive alerts as new specimens are imaged and uploaded.
- Resource type
- SNS topic
- Amazon Resource Name (ARN)
- arn:aws:sns:eu-west-3:253260001075:haisslab-object_created
- AWS region
- eu-west-3
Resources
Vendor resources
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How to cite
Interhemispheric Cortex Connectivity Microscopy Dataset was accessed on DATE from https://registry.opendata.aws/interhemispheric-cortex-connectivity .
License
Creative Commons Attribution 4.0 International (CC-BY-4.0)
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